Microbiome Analysis Workshop

This workshop will provide attendees with in-depth training on analysis of bacterial community sequence data, both whole metagenome shotgun and 16S. Tools for community and functional profiling will be explored. The workshop is hands-on with attendees performing analyses and looking at results.

Included topics

• Introduction to Linux
• Introduction & Metadata coordination
• Sampling considerations
• Sequencing of metagenomics samples
• 16S analysis and hands on exercises using R Studio and dada2
• Whole metagenome sequence analysis and hands on exercise using MetaPhlAn & HUMAnN
• Metatranscriptomics